{
  "ts": "2026-11-05T07:07:14Z",
  "wave": 222,
  "type": "vdj-expanded-repertoire",
  "gene_library": {
    "V_count": 95,
    "D_count": 81,
    "J_count": 30,
    "classes": 4,
    "theoretical": 923400
  },
  "repertoire": {
    "mature_antibodies": 45,
    "activated_b_cells": 75,
    "naive_b_cells": 425,
    "total": 545,
    "coverage_pct": 0.06
  },
  "activated_files": [
    "biomeos-topology-self.json",
    "songbird-topology-self.json",
    "beardog-topology-self.json",
    "nestgate-topology-self.json",
    "petaltongue-topology-self.json",
    "sweetgrass-topology-self.json",
    "rhizocrypt-topology-self.json",
    "toadstool-topology-self.json",
    "barracuda-topology-self.json",
    "coralreef-topology-self.json",
    "loamspine-topology-self.json",
    "squirrel-topology-self.json",
    "skunkbat-topology-self.json",
    "sourdough-topology-self.json",
    "swarmvine-topology-self.json",
    "bingocube-topology-self.json",
    "dromedary-topology-self.json",
    "biomeos-state-active.json",
    "songbird-state-active.json",
    "beardog-state-active.json"
  ],
  "naive_sample": [
    "gaia-modulate-potential.json",
    "gaia-absorb-latent.json",
    "gaia-braid-suppressed.json",
    "gaia-ferment-volatile.json",
    "klein-sort-mesh.json",
    "klein-braid-dormant.json",
    "klein-twist-kinetic.json",
    "klein-observe-iterative.json",
    "sacred-whisper-lateral.json",
    "sacred-spiral-expressed.json",
    "sacred-compost-spine.json",
    "sacred-match-iterative.json",
    "scaffold-narrow-latent.json",
    "scaffold-state-expressed.json",
    "scaffold-index-external.json",
    "scaffold-body-suppressed.json",
    "central-whisper-external.json",
    "central-spiral-gate.json",
    "central-tunnel-iterative.json",
    "central-connect-ephemeral.json",
    "sovereign-broadcast-iterative.json",
    "sovereign-expand-passive.json",
    "sovereign-match-upstream.json",
    "sovereign-listen-upstream.json",
    "immune-observe-external.json",
    "immune-oxidize-suppressed.json",
    "immune-wave-recursive.json",
    "immune-whisper-spine.json",
    "neural-map-internal.json",
    "neural-search-Klein.json"
  ],
  "V_segments": [
    "gaia",
    "klein",
    "sacred",
    "scaffold",
    "central",
    "sovereign",
    "immune",
    "neural",
    "metabolic",
    "genetic",
    "digestive",
    "endocrine",
    "cognitive",
    "muscular",
    "opsonin",
    "neutron",
    "primal",
    "mushroom",
    "cron",
    "port",
    "gate",
    "wire",
    "feed",
    "sink",
    "model",
    "rust",
    "rustscript",
    "web",
    "tor",
    "dns",
    "tls",
    "git",
    "forgejo",
    "github",
    "docker",
    "systemd",
    "ollama",
    "dromedary",
    "songbird",
    "beardog",
    "nestgate",
    "squirrel",
    "skunkbat",
    "swarmvine",
    "bingocube",
    "coralreef",
    "barracuda",
    "loamspine",
    "petaltongue",
    "sweetgrass",
    "rhizocrypt",
    "toadstool",
    "sourdough",
    "biomeos",
    "eastgate",
    "northgate",
    "bluegate",
    "sporegate",
    "graphenegate",
    "graftgate",
    "southgate",
    "irongate",
    "polaris",
    "router",
    "mikrotik",
    "vizio",
    "lisp",
    "json",
    "rss",
    "nostr",
    "redis",
    "nats",
    "postgres",
    "electron",
    "proton",
    "neutron",
    "photon",
    "quark",
    "lepton",
    "cellulose",
    "chitin",
    "collagen",
    "keratin",
    "lignin",
    "elastin",
    "peptidoglycan",
    "fibronectin",
    "avogadro",
    "thermodynamic",
    "entropy",
    "pi",
    "phi",
    "euler",
    "planck",
    "boltzmann"
  ],
  "D_segments": [
    "body",
    "topology",
    "geometry",
    "scan",
    "pulse",
    "state",
    "map",
    "chain",
    "lineage",
    "evolution",
    "sensor",
    "probe",
    "feed",
    "drain",
    "lock",
    "flow",
    "fold",
    "twist",
    "loop",
    "spiral",
    "wave",
    "observe",
    "digest",
    "express",
    "secrete",
    "absorb",
    "radiate",
    "compress",
    "expand",
    "reduce",
    "oxidize",
    "ferment",
    "compost",
    "braid",
    "weave",
    "bind",
    "cleave",
    "replicate",
    "transcribe",
    "translate",
    "mutate",
    "select",
    "adapt",
    "migrate",
    "hibernate",
    "signal",
    "respond",
    "amplify",
    "suppress",
    "modulate",
    "regulate",
    "classify",
    "sort",
    "index",
    "search",
    "match",
    "filter",
    "encrypt",
    "decrypt",
    "hash",
    "sign",
    "verify",
    "attest",
    "connect",
    "disconnect",
    "bridge",
    "tunnel",
    "route",
    "forward",
    "listen",
    "speak",
    "whisper",
    "shout",
    "broadcast",
    "narrow",
    "birth",
    "death",
    "growth",
    "decay",
    "repair",
    "regenerate"
  ],
  "J_segments": [
    "self",
    "other",
    "mesh",
    "spine",
    "gate",
    "membrane",
    "surface",
    "internal",
    "external",
    "upstream",
    "downstream",
    "lateral",
    "active",
    "passive",
    "dormant",
    "volatile",
    "persistent",
    "ephemeral",
    "Klein",
    "Mobius",
    "fractal",
    "recursive",
    "iterative",
    "emergent",
    "manifest",
    "latent",
    "expressed",
    "suppressed",
    "potential",
    "kinetic"
  ]
}