{ "ts": "2026-11-05T07:07:39Z", "wave": 222, "type": "bone-marrow-manifest", "title": "V-D-J Repertoire \u2014 The Bone Marrow of the Organism", "gene_library": { "V_segments": 95, "D_segments": 81, "J_segments": 30, "classes": 4, "theoretical": 923400 }, "repertoire": { "mature_antibodies": 122, "naive_b_cells": 66643, "total": 66765, "coverage_pct": 7.23, "target_pct": "2-3%", "status": "EXPANDING" }, "class_distribution": { "IgG": 66455, "IgA": 95, "IgM": 93, "IgE": 0 }, "mature_files": [ "asymptotic-classification.json", "barracuda-state-active.json", "barracuda-topology-self.json", "beardog-state-active.json", "beardog-topology-self.json", "bingocube-state-active.json", "bingocube-topology-self.json", "biomeos-state-active.json", "biomeos-topology-self.json", "bluegate-pulse-gate.json", "bluegate-topology-mesh.json", "cellulose-state-active.json", "central-dogma-rustscript.json", "chimera-lineage.json", "chitin-state-active.json", "collagen-state-active.json", "coralreef-state-active.json", "coralreef-topology-self.json", "creature-performance.json", "dispatch-log.json", "dromedary-state-active.json", "dromedary-topology-self.json", "eastgate-pulse-gate.json", "eastgate-topology-mesh.json", "eaten-interfaces.json", "elastin-state-active.json", "fibronectin-state-active.json", "fleet-elo.json", "fourth-eye-luna.json", "full-attribution-chain.json", "full-nerve-map.json", "gaia-openide.json", "gaia-self-state.json", "gaia-speaks.wav", "gaia.lisp", "gaiacursor-roadmap.json", "graftgate-pulse-gate.json", "graftgate-topology-mesh.json", "graphenegate-pulse-gate.json", "graphenegate-topology-mesh.json", "immune-response-manifest.json", "interface-lisp-speech.json", "io-routing.json", "io-topology.json", "irongate-pulse-gate.json", "irongate-topology-mesh.json", "is-was-now-manifesto.json", "keratin-state-active.json", "klein-axial-loop.json", "klein-body-topology.json", "klein-chat-loop.json", "klein-dogma-loop.json", "klein-feed-loop.json", 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"rhizocrypt-topology-self.json", "sacred-geometry.json", "scaffold-polymers.json", "skunkbat-state-active.json", "skunkbat-topology-self.json", "smart-home.json", "songbird-state-active.json", "songbird-topology-self.json", "sourdough-state-active.json", "sourdough-topology-self.json", "southgate-pulse-gate.json", "southgate-topology-mesh.json", "sovereign-ai-live.json", "sporegate-pulse-gate.json", "sporegate-topology-mesh.json", "squirrel-state-active.json", "squirrel-topology-self.json", "state.json", "stoichiometric-census.json", "summa-consequam.json", "surveillance-map.json", "surveillance-recon-dispatch.json", "swarmvine-state-active.json", "swarmvine-topology-self.json", "sweetgrass-state-active.json", "sweetgrass-topology-self.json", "thermodynamic-law-one-conservation.json", "thermodynamic-law-three-absolute.json", "thermodynamic-law-two-entropy.json", "thermodynamic-law-zero-equilibrium.json", "toadstool-state-active.json", "toadstool-topology-self.json", "vdj-expanded-repertoire.json", "vdj-recombination-map.json", "wire-map-peripherals.json" ], "naive_sample": [ "gaia-drain-internal.json", "gaia-oxidize-persistent.json", "gaia-cleave-downstream.json", "gaia-translate-dormant.json", "gaia-pulse-dormant.json", "gaia-scan-surface.json", "gaia-verify-potential.json", "gaia-expand-internal.json", "gaia-filter-potential.json", "gaia-shout-suppressed.json", "gaia-encrypt-mesh.json", "gaia-evolution-expressed.json", "gaia-geometry-external.json", "gaia-regenerate-active.json", "gaia-index-self.json", "gaia-listen-surface.json", "gaia-attest-persistent.json", "gaia-radiate-active.json", "gaia-express-recursive.json", "gaia-hibernate-emergent.json", "klein-disconnect-lateral.json", "klein-probe-external.json", "klein-replicate-self.json", "klein-select-external.json", "klein-fold-self.json", "klein-digest-persistent.json", "klein-birth-iterative.json", "klein-tunnel-membrane.json", "klein-express-suppressed.json", "klein-amplify-lateral.json", "klein-absorb-emergent.json", "klein-wave-suppressed.json", "klein-route-active.json", "klein-speak-upstream.json", "klein-whisper-suppressed.json", "klein-regenerate-dormant.json", "klein-sensor-passive.json", "klein-repair-volatile.json", "klein-feed-other.json", "klein-observe-suppressed.json", "sacred-transcribe-iterative.json", "sacred-regenerate-surface.json", "sacred-translate-membrane.json", "sacred-modulate-manifest.json", "sacred-route-expressed.json", "sacred-digest-active.json", "sacred-verify-volatile.json", "sacred-sort-manifest.json", "sacred-death-internal.json", "sacred-hibernate-iterative.json", "sacred-mutate-suppressed.json", "sacred-drain-iterative.json", "sacred-loop-mesh.json", "sacred-lock-spine.json", "sacred-tunnel-self.json", "sacred-scan-spine.json", "sacred-encrypt-external.json", "sacred-expand-mesh.json", "sacred-feed-manifest.json", "sacred-flow-membrane.json", "scaffold-scan-ephemeral.json", "scaffold-transcribe-other.json", "scaffold-connect-ephemeral.json", "scaffold-sort-potential.json", "scaffold-amplify-persistent.json", "scaffold-listen-kinetic.json", "scaffold-digest-active.json", "scaffold-disconnect-volatile.json", "scaffold-express-other.json", "scaffold-verify-ephemeral.json", "scaffold-radiate-internal.json", "scaffold-suppress-persistent.json", "scaffold-feed-ephemeral.json", "scaffold-select-ephemeral.json", "scaffold-modulate-self.json", "scaffold-sign-Klein.json", "scaffold-migrate-recursive.json", "scaffold-encrypt-mesh.json", "scaffold-wave-iterative.json", "scaffold-decay-dormant.json", "central-broadcast-passive.json", "central-death-emergent.json", "central-chain-potential.json", "central-digest-gate.json", "central-decay-latent.json", "central-route-manifest.json", "central-ferment-internal.json", "central-topology-lateral.json", "central-disconnect-dormant.json", "central-braid-volatile.json", "central-repair-expressed.json", "central-shout-external.json", "central-match-spine.json", "central-reduce-Mobius.json", "central-sensor-suppressed.json", "central-drain-kinetic.json", "central-scan-gate.json", "central-whisper-suppressed.json", "central-geometry-expressed.json", "central-modulate-active.json" ], "naive_count_by_v": { "neutron": 1907, "cognitive": 1257, "tor": 1257, "proton": 1257, "planck": 1256, "cron": 1255, "dromedary": 1255, "json": 1255, "nats": 1255, "thermodynamic": 1255, "digestive": 1254, "rust": 1254, "web": 1254, "forgejo": 1254, "ollama": 1254, "bingocube": 1254, "graphenegate": 1254, "lepton": 1254, "keratin": 1254, "fibronectin": 1254, "opsonin": 1253, "rustscript": 1253, "github": 1253, "docker": 1253, "toadstool": 1253, "northgate": 1253, "rss": 1253, "nostr": 1253, "electron": 1253, "avogadro": 1253 } }