Ecosystem Inventory
Complete repository inventory across all three ecoPrimals organizations — every repo, its purpose, and current status.
Last Updated: June 20, 2026
Every repository across the three ecoPrimals organizations. All repositories (except whitePaper) are scyBorg-licensed: AGPL-3.0-or-later for code, ORC for game mechanics, CC-BY-SA 4.0 for creative/docs. All are intended to be fully public. Repos already on GitHub link directly; the rest are in the process of being source-published, with binaries available now via plasmidBin.
ecoPrimals — Infrastructure & Primals (~21 repos)
The core organization. Contains all primals (the sovereign Rust binaries), infrastructure repos, and tooling.
Foundation Primals (8)
These form the NUCLEUS deployment architecture.
| Primal | Domain | Status | Tests |
|---|---|---|---|
| 🐻🐕 bearDog | Cryptographic spine — Tower Atomic, Dark Forest, Pure Rust Tor | Source publishing in progress | 5,041 |
| 🎵🐦 songBird | Nervous system — TLS 1.3, O(n) discovery hub, 4-tier NAT | Public | 1,763 |
| 🪺🔒 nestGate | Data layer — content-addressed storage, ZFS, isomorphic IPC | Public | 1,474 |
| 🐸🍄 toadStool | Compute layer — GPU/NPU/CPU dispatch, f64 discovery | Public | 1,000+ |
| 🐿️🧠 squirrel | AI brain — vendor-agnostic MCP routing, sovereign inference | Public | 7,165 |
| 🌿🖥️ biomeOS | Conductor — Neural API, NUCLEUS composition, Dark Forest | Public | 8,351 |
| 🪸🌊 coralReef | Sovereign compiler — WGSL to native GPU, no LLVM/Mesa/vendor SDK | Public | 3,038 |
| 🐟⚡ barraCuda | Math engine — 800+ WGSL shaders, f64 science on consumer GPUs | Public | 3,348+ |
Post-NUCLEUS Primals (5)
Higher-order capabilities that compose on the foundation. Active codebases, evolving toward full NUCLEUS integration.
| Primal | Domain | Status | Tests |
|---|---|---|---|
| 🌸👅 petalTongue | The face — 5-mode UniBin UI (desktop, TUI, web, headless, status) | Public | 6,040 |
| 🌱🔐 rhizoCrypt | Scratch pad — ephemeral DAG, 6 slice modes, dehydration to loamSpine | Public | 509 |
| 🍯🌾 sweetGrass | Attribution — W3C PROV-O provenance, Braid model, fair credit | Public | 496 |
| 🪨📖 loamSpine | Fossil record — immutable ledger, Loam certificates, federation | Public | 416 |
| skunkBat | Immune system — metadata-only threat detection, graduated response | Source publishing in progress | — |
Tooling & Infrastructure (9)
| Repository | Purpose | Status |
|---|---|---|
| 🍞🧪 sourDough | Starter culture — scaffolds new primals, produces genomeBin packages | Public |
| 🎲🧊 bingoCube | Human trust bridge — BLAKE3 progressive reveal, visual/audio identity verification | Public |
| 🧫🔬 cellMembrane | Deployment layer — K-Derm topology, gate enrollment, NUCLEUS systemd, cascade pipeline | Public (680 tests) |
| 🧪🤖 agentReagents | Agent chemistry — composable reagent patterns for sovereign AI agents | Publishing soon |
| ⚖️📊 benchScale | Scaling studies — cross-primal benchmarks, composition cost characterization | Publishing soon |
| 💧📡 wateringHole | Ecosystem communications, standards, glossary — shared dev context | Public |
| 🖨️🌐 sporePrint | This website — primals.eco | Public |
| 🧬📦 plasmidBin | Binary distribution surface — genomeBins, ecoBins, metadata.toml | Public |
| 📄🔒 whitePaper | Research documentation — will bud public sub-repos over time | Private |
syntheticChemistry — Science Validation (~10 repos)
All springs are public. Each spring validates one scientific domain through executable experiments with quantified checks.
Springs (8)
| Spring | Domain | Status | Checks | Repo |
|---|---|---|---|---|
| 💧🔬 wetSpring | Microbiology, 16S, metagenomics | Active | 1,200+ | syntheticChemistry/wetSpring |
| ♨️🧪 hotSpring | Physics, thermodynamics, Anderson localization | Active | 2,500+ | syntheticChemistry/hotSpring |
| 🌬️💨 airSpring | Atmospheric, climate, fluid dynamics | Active | 800+ | syntheticChemistry/airSpring |
| 🧠⚡ neuralSpring | ML primitives, isomorphism, structure prediction | Active | 4,500+ | syntheticChemistry/neuralSpring |
| 🌍🪨 groundSpring | Geoscience, soil, hydrology | Active | 600+ | syntheticChemistry/groundSpring |
| 🏥💊 healthSpring | PK/PD, microbiome, biosignal, drug discovery | Active | 795+ | syntheticChemistry/healthSpring |
| 🎮🎲 ludoSpring | Game science, HCI, procedural generation | V30 | 1,692+ | syntheticChemistry/ludoSpring |
| primalSpring | Composition validation, deploy graphs, BYOB | Active | 959 (85 scenarios) | syntheticChemistry/primalSpring |
Infrastructure (3)
| Repository | Purpose | Status | Tests | Repo |
|---|---|---|---|---|
| rustChip | Pure Rust Akida NPU driver — standalone extraction from ToadStool neuromorphic layer | Active | 367 | syntheticChemistry/rustChip |
| ⚡🔌 ionChannel | Inter-spring communication layer | — | — | syntheticChemistry/ionChannel |
rustChip capabilities:
- VFIO backend: Pure Rust container/group/device lifecycle, BAR mapping, DMA — no kernel module, user-level via udev
- FBZ parser: Reverse-engineered Akida model format (varint + Snappy + zero-padding probe)
- Silicon model: AKD1000/AKD1500 register map, 80-NPU mesh discovery, 10 MB SRAM
- Novel systems: HybridESN, multi-tenancy (7 programs), online evolution (136 gen/s), temporal PUF, adaptive sentinel
- Hardware validation: 10 BEYOND_SDK discoveries, 5,978 live calls in hotSpring lattice QCD
- Compute trio integration: Output feeds barraCuda shaders via
&[f32]. VFIO patterns mirror coralReef ember/glowplug architecture - License: scyBorg triple (AGPL + CC-BY-SA + ORC) with symbiotic exception for hardware partners
- Science page: Neuromorphic Sovereign Driver
Archived
The following repos have been archived or are being relocated:
- coralForge → renamed to helixVision, moved to sporeGarden
- blueFish → moved to sporeGarden
- agentReagents (duplicate) → archived, canonical version in ecoPrimals
- benchScale (duplicate) → archived, canonical version in ecoPrimals
sporeGarden — Products (3 repos)
User-facing products that compose primals into complete applications. Each product demonstrates that primal composition produces real, usable software.
| Product | What | Status | Repo |
|---|---|---|---|
| esotericWebb | Cross-evolution CRPG — player state as DAG, save games as Loam certificates | Public | sporeGarden/esotericWebb |
| helixVision | Sovereign structure prediction — AlphaFold2/3 reimagined in pure Rust f64 | Moving to sporeGarden | sporeGarden/helixVision (pending) |
| 🐟🔵 blueFish | Sovereign data pipeline — NCBI/UniProt/PDB ingestion, format conversion | Moving from syntheticChemistry | sporeGarden/blueFish (pending) |
By the Numbers
| Metric | Value |
|---|---|
| Total repositories | ~37 (22 ecoPrimals + 12 syntheticChemistry + 3 sporeGarden) |
| Foundation primals | 8 |
| Post- NUCLEUS primals | 5 |
| Meta/tooling | 3 ( sourDough, bingoCube, agentReagents/benchScale publishing soon) |
| Infrastructure repos | 5 ( wateringHole, sporePrint, plasmidBin, cellMembrane, whitePaper) |
| Science springs | 8 (7 domain + 1 meta-spring) |
| User-facing products | 3 ( esotericWebb, helixVision, blueFish) |
| Public repos (today) | 13 primals + 8 springs + 3 infra + 1 product = 25 |
| Source publishing in progress | ~5 (bearDog, skunkBat, agentReagents, benchScale, whitePaper) |
| License | scyBorg — AGPL-3.0-or-later (code) + ORC (game mechanics) + CC-BY-SA 4.0 (creative/docs) |
| Total Rust LOC | 3,209,814 (2.6M primals + 614K springs, measured via tokei April 2026) |
| WGSL shaders | 952 files, 73,838 lines |
| Total test functions | 107,143 (98K primals + 9K springs) |
| C dependencies | Zero (entire ecosystem) |
This inventory is the ground truth for sporePrint. When in doubt about what exists, check here. For deeper dives: Primal Catalog, Spring Catalog, Deployment Model.